Return to the 2015 MSM Consortium Meeting Agenda
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Category | Group | Title | Last Name | First Name | |
Biomaterials | 2 | Biomaterials: Predictive Design, Synthesis and Material Properties | Ebrahimi | Davoud | |
Cancer | 1 | Incorporating Patient-Specific Imaging Data and Therapeutic Regimens to Predict Eventual Response in Locally Advanced Breast Cancer via a Multi-Scale Model | Barnes | Stephanie | |
Cancer | 1 | Multi-scale Treatment Response Model for Triple Negative Breast Cancer Linking Drug Administration Schedules to Tumor Cell Population Dynamics | McKenna | Matthew | |
Cancer | 1 | Understanding complex drug response behavior of BRAF-mutated melanoma cells treated with targeted therapies | Paudel | Bishal | |
Cancer | 1 | A Controllable and Imaging Compatible 3D Tumor Environment to Experimentally Test and Refine Tumor Growth Models | Searfoss | Abigail | |
Cancer | 1 | A Numerically Efficient Mechanically Coupled Reaction-Diffusion Model to Predict the Response of Breast Cancer to Neoadjuvant Therapy | Weis | Jared | |
Cardiovascular | 2 | Multi-scale Models of Fibrin Networks and Blood Clots | Alber | Mark | |
Cardiovascular | 2 | Regulation of Store-Operated Calcium Entry in Endothelial Flow-Induced Nitric Oxide Production | Barbee | Kenneth | |
Cardiovascular | 1 | A Predictive Multiscale Model for Simulating Platelets Activation in Shear Flows | Bluestein | Danny | |
Cardiovascular | 1 | In vivo studies of NO and ATP-induced arteriolar vasodilation during hypoxia | Buerk | Donald | |
Cardiovascular | 2 | VASCULAR ADAPTATION: CLOSING THE LOOP BETWEEN GENE EXPRESSION AND MORPHOLOGICAL CHANGE | Garbey | Marc | |
Cardiovascular | 2 | Multi-Scale Laws of Myocardial Growth and Remodeling | Guccione | Julius | |
Cardiovascular | 1 | Coupling an Agent-Based Model of Scar Formation to a Finite-Element Model of Tissue Mechanics | Holmes | Jeffrey | |
Cardiovascular | 2 | MSM of Thrombus Biomechanics in Aortic Aneurysms | Humphrey | Jay | |
Cardiovascular | 2 | High-throughput evaluation of platelet function under flow following trauma reveals platelet function defects & Recapitulation of mechanisms during trauma-induced coagulopathy in whole blood microfluidic assays | Li | Ruizhi | |
Cardiovascular | 1 | Patient-specific modeling and analysis of individual sickle cell behavior in transient hypoxia | Li | Xuejin | |
Cardiovascular | 2 | Multiscale Spatial and Temporal Signaling and Patterning of Cells and Tissues: Stochastic Control Networks and Tissue Wound Healing | Liang | Jie | |
Cardiovascular | 2 | Multiscale flow modelling of cell ensembles and reactive species transport with data-driven cellular activation models | Lu | Yichen | |
Cardiovascular | 2 | Multiscale Modeling of Blood Clotting: Coagulation Cascade and Platelets Aggregation | Yazdani | Alireza | |
Cardiovascular | 2 | A Multi-Scale Mechanobiological Model Considering the Structure and Interrelation of ECM Constituents in Aorta | Zhang | Katherine | |
Cellular Physiology | 2 | Shear Stress-Dependent NO, ATP and ADP Production from Endothelial Cells – a Modeling Approach | Buerk | Donald | |
Cellular Physiology | 1 | Modeling of the microenvironment around a pH electrode tip | Calvetti | Daniela | |
Cellular Physiology | 1 | Multiscale studies of mitochondrial calcium cycling | Jafri | Mohsin | |
Cellular Physiology | 1 | Multiscale Models of the Nuclear Pore Complex | Mofrad | Mohammad | |
Cellular Physiology | 2 | Image-Based Multi-scale Mechanical Models for Predicting In Vitro Remodeling in Fibrin Gels | Sander | Edward | |
Cellular Physiology | 1 | Effects of 3D Geometries on Cellular Gradient Sensing and Polarization | Spill | Fabian | |
Cellular Physiology | 1 | Glomerular intercellular cross talk elaborately regulates podocyte injury and repair: insights from a 3D multiscale modeling study | Xiaobo | Zhou | |
Genetics | 1 | Multi-scale modeling of genetic variation in a developmental network | Marjoram | Paul | |
Imaging | 1 | The power of coupled multiscale imaging and modeling - How good is good enough? | Knothe Tate | Melissa | |
Imaging | 1 | Toward Imaging-based Asthma Sub-Grouping: Cluster Analysis with Multiscale Structural and Functional Variables in Asthma Populations | Lin | Ching-Long | |
Imaging | 1 | Paired, seamless multiscale imaging and modeling as a springboard to bridge the gap between nano- and macroscale models |
Pereira | Andre | |
Immunology | 1 | Fluid Pumping and Mass Transfer in the Lymphatic System | Moore | James | |
Immunology or Musculoskeletal | 1 | Spatiotemporal Metabolic Modeling of Chronic Wound Biofilm Consortia | Henson | Michael | |
Infectious Disease | 1 | Predictive Multiscale Modeling of Microbial Consortia Biofilms | Carlson | Ross | |
Infectious Disease | 1 | Bacterial Adaptation to Host-Induced Environmental Stress | May | Elebeoba | |
Infectious Disease | 1 | A hybrid multi-scale model of tuberculosis maps bacterial metabolic scale dynamics to host tissue scale infection outcomes | Kirschner | Denise | |
Metabolism | 1 | Simulating Metabolism with Statistical Thermodynamics | Cannon | William | |
Modeling Methodology | 2 | Nanoscale and Molecular Framework for Modeling and Applying Communication at the Bottom | Paluh | Janet | |
Modeling tools and methods | 2 | The Reference Model Uses Modular Population Generation | Barhak | Jacob | Link to Poster |
Modeling tools and methods | 2 | StochSS: An Integrated Development Environment for Simulation and Analysis of Discrete Stochastic Biochemical Models | Drawert | Brian | |
Modeling tools and methods | 1 | Computing non-equilibrium steady states for a biochemical network | Fleming | Ronan | |
Modeling tools and methods | 2 | Accurate solution of FBA models using large-scale optimization in quadruple precision | Saunders | Michael | |
Modeling tools and methods | 1 | Fully Integrated Python Tools for Modeling, Analysis and Reproducibility | Sauro | Herbert | |
Modeling tools and methods | 1 | Multi-scale inverse problems: Beyond the modeling limit | Somersalo | Erkki | |
Modeling tools and methods | 2 | Delivering Models and Simulations as a Service (MaSS) with Galaxy | Walker | Mark | |
Musculoskeletal | 2 | Multiscale and Multi-physics Modeling of Degenerative Disc Disease and in silico Clinical Trials for Disc Regeneration | Gu | Weiyong | |
Musculoskeletal | 2 | Multiscale Modeling of Wound Healing | Haugh | Jason | |
Musculoskeletal | 2 | Multiscale Modeling of Bone | Jasiuk | Iwona | |
Musculoskeletal | 1 | Multi-scale Muscle-Driven Simulation of Human Subjects: Muscle and Joint Mechanics in TKR | Shelburne | Kevin | |
Musculoskeletal | 2 | Modeling bone MSC lineage progression in a growth factor – loaded CaP scaffold subjected to mechanical stress | Tan | Hua | |
Musculoskeletal | 2 | Multi-scale mechanics of the tendon-to-bone attachment | Boyle | John | |
Musculoskeletal | 2 | Multiscale Modeling of Facet Capsule Biology | Winkelstein | Beth | |
Neuroscience | 2 | Integrating Systems Biology Markup Language (SBML) in the NEURON simulator | Bulanova | Anna | |
Neuroscience | 1 | Biophysical models of C6 glioma growth in rats | Hormuth | David | |
Neuroscience | 2 | The Volterra Functional Series is a Viable Alternative to Kinetic Models for Synaptic Modeling -Calibration and Benchmarking | Hu | Eric | |
Neuroscience | 2 | Towards an accurate multi-scale computational model for studying retinal prosthetic electrode design | Lazzi | Gianluca | |
Neuroscience | 2 | Coupling 1D and 3D domains in neuroscience simulations | McDougal | Robert | |
Neuroscience | 1 | Optimizing computer models of layer 5 motor cortex pyramidal neurons using somatic whole cell recordings | Neymotin | Samuel | |
Neuroscience | 2 | Estimation of Local Field Potentials in a Three-Dimensional, Computational Model of the Hippocampal Dentate Gyrus: A Multiscale, Multimodal Framework | Yu | Gene | |
Pharmacology | 2 | Multiscale Modeling of Functionalized Nanocarriers in Targeted Drug Delivery: Effects of Blood Cell Interactions and Temporal Hydrodynamic Correlations | Ayyaswamy | Portonovo | |
Pharmacology | 2 | Multiscale Modeling of Functionalized Nanocarriers in Targeted Drug Delivery: Effects of Blood Cell Interactions and Temporal Hydrodynamic Correlations | Eckmann | David | |
Pharmacology | 1 | Virtual Experiments Falsify a Prevailing Mechanistic Explanation for Acetaminophen Induced Liver Injury and Enable Discovery of Plausible Alternative Hypotheses | Hunt | C. Anthony | |
Pharmacology | 2 | Next-Generation Pharmacodynamic Models for Targeted Drug Delivery: Multiscale Model for Nanocarrier Adhesion at the Live Cell Interface and Comparison to In Vivo Experiments | Radhakrishnan | Ravi | |
Pharmacology | 1 | Tightly Coupled In Vivo Studies to Inform an In Silico Model of Acetaminophen Toxicity | Sluka | Jim | |
Population Modeling | 1 | A cyberinfrastructure supporting transdisciplinary research into population modeling at multiple scales | Bisset | Keith | |
Population Modeling | 2 | Accurate rapid estimation of physics based model outputs with surrogate techniques | Pruett | William |
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