| Number |
Name |
Email |
Abstract Title |
|---|
|
Keynote
|
Martin Kohn |
marty.kohn@us.ibm.com |
Watson, Cognitive Computing and Healthcare |
|
1
|
Gary An |
docgca@gmail.com |
The Computational Modeling Assistant: semi-automating the generation and implementation of dynamic computational models. |
|
2
|
Gary An, Scott Christley, Gary Nieman, Yoram Vodovotz |
docgca@gmail.com |
Lung Multi-scale Model for the evaluation of the pathophysiology of Ventilator Induced Lung Injury during the treatment of Acute Respiratory Distress Syndrome. |
|
3
|
Yoram Vodovotz, Gary Nieman, Scott Christley, Gary An |
vodovotzy@upmc.edu |
Multiscale Modeling of Ventilator Effects on Lung Inflammation and the propagation to Multiple Organ Dysfunction Syndrome |
|
4
|
Dan Beard |
beardda@gmail.com |
The Virtual Physiological Rat Project |
|
5
|
Georgiy Bobashev |
bobashev@rti.org |
Multiscale modeling of drug use: from neurobiology to behavior and back. |
|
6
|
David Christini |
dchristi@med.cornell.edu |
Atrial myocyte model parameter identification via dynamic electrophysiology protocols and automated search algorithms |
|
7
|
Roman Voronov, Timothy Stalker, Lawrence Brass, Scott Diamond |
rvoronov@seas.upenn.edu |
Molecular Transport within Thrombi Based on In-Vivo 3D Confocal Imaging with Single Platelet Resolution |
|
8
|
Scott Diamond, Thomas Colace, Ryan Muthard, John Welsh, Timothy Stalker, Skip Brass |
sld@seas.upenn.edu |
Chemical, Pressure, and Shear Rate Gradients in Multiscale Blood Systems Biology |
|
9
|
David Eckmann, R.Radhakrishnan, P.S. Ayyaswamy |
David.Eckmann@uphs.upenn.edu |
Multiscale Modeling and optimization of nanocarrier targeting in drug delivery |
|
10
|
Daniel Einstein, Kuprat, Kabilan, Corley |
daniel.einstein@pnnl.gov |
Enhanced Nonlinear Krylov Accelerator for Stable Bi-Directional Multiscale Coupling: Application to Pulmonary Airflow |
|
11
|
Mounya Elhilali |
mounya@jhu.edu |
Multiscale Processing of Complex Acoustic Scenes |
|
12
|
Ben Ellis, Shawn Reese, Jeffrey Weiss |
Ben.Ellis@utah.edu |
Micromechanical Model of a Collagen-Based Tendon Surrogate |
|
13
|
Ahmet Erdemir |
erdemira@ccf.org |
Predicting Cell Deformations from Body Level Mechanical Loads - Tackling the Hurdles
Abstract Poster
|
|
14
|
Stacey Finley, Sasha Popel |
sdfinley@jhu.edu |
Multiscale molecular-detailed pharmacokinetic and pharmacodynamic model predicts response to anti-VEGF therapies in cancer |
|
15
|
Ronan Fleming*, Yuekai Sun, Ines Thiele, Michael Saunders |
ronan.mt.fleming@gmail.com |
A globally convergent algorithm for computing non-equilibrium steady state concentrations in genome-scale biochemical networks |
|
16
|
Yukei Sun*, Ronan Fleming, Ines Thiele, Michael Saunders |
ronan.mt.fleming@gmail.com |
Flux balance analysis of multi-scale biochemical reaction networks |
|
17
|
Joann Flynn, Denise Kirschner, Jennifer Linderman |
kirschne@umich.edu |
A systems biology approach to understanding antigen presentation capacity in a lymph node |
|
18
|
Joann Flynn, Denise Kirschner, Jennifer Linderman |
kirschne@umich.edu |
Multi-scale analysis of TNF-regulated immune response to Mycobacterium tuberculosis infection |
|
19
|
Joann Flynn, Denise Kirschner, Jennifer Linderman |
kirschne@umich.edu |
Multi-scale modeling reveals the influence of opposing dynamics of TNF and
IL-10 in Mycobacterium tuberculosis infection
|
|
20
|
Lou Gross |
gross@NIMBioS.org |
NIMBioS: Examples of Research Efforts at the Interface of Mathematics and the Life Sciences involving Multiple Scales |
|
21
|
Jay Humphrey, J.S. Wilson |
jay.humphrey@yale.edu |
Multi-Resolution, Multi-Scale Model of Abdominal Aortic Aneurysm Enlargement |
|
22
|
Tony Hunt |
a.hunt@ucsf.edu |
Falsification/Validation of Enzyme Induction Mechanisms within a Validated, Multiscale Liver Model Download poster here Media:Hunt's_MSM_Enz_Ind_Poster.pdf |
|
23
|
Tony Hunt |
a.hunt@ucsf.edu |
Eight reasons why relational grounding facilitates developing scientifically useful multiscale models Download poster here Media:Hunt's_MSM_Rel_Gnd_Poster.pdf |
|
24
|
Mike King, Nipa Mody, Weiwei Wang |
mike.king@cornell.edu |
Multiscale model of platelet translocation and collision |
|
25
|
Ching-Long Lin |
ching@engineering.uiowa.edu |
A Numerical Study of Structure and Function Relationships in Normal and Severe Asthmatic Lungs |
|
26
|
Yaling Liu |
yal310@Lehigh.EDU |
Multiscale Particulate and Continuum Model for Nanoparticle Targeted Delivery |
|
27
|
Wing Kam Liu |
w-liu@northwestern.edu |
IMFEM Framework for Drug Delivery in Microvasculature |
|
28
|
Andrew D McCulloch |
amcculloch@eng.ucsd.edu |
Multi-Scale Systems Models of Murine Heart Failure |
|
29
|
Sriram Neelamegham and Gang Liu |
neel@buffalo.edu |
Application of systems biology to construct and simulate glycosylation reaction networks |
|
30
|
James Moore |
jmoorejr@bme.tamu.edu |
LUMPED-PARAMETER MODEL OF A CHAIN OF LYMPHANGIONS IN SERIES – A PARAMETER SENSITIVITY STUDY |
|
31
|
Robert McDougal, Michael L Hines, William W Lytton |
robert.mcdougal@yale.edu |
Reaction-Diffusion Modeling in the NEURON Simulator |
|
32
|
Sam Neymotin, Yosef Skolnick, Robert McDougal, Markus Hilscher, Thiago Moulin, William Lytton |
samuel.neymotin@yale.edu |
Simulated relations of molecular, cellular, and neuronal network dynamics in a PFC network Abstract
Poster
|
|
33
|
Linda Petzold |
petzold@cs.ucsb.edu |
Stochastic Simulation Service: Towards an Integrated Development Environment for Modeling and Simulation of Stochastic Biochemical Systems |
|
34
|
Vipul Bhargava et al. |
|
Lineage Segregation in Embryonic Stem Cells: A Novel Transcriptomics Method for Identifying the Parts Lists |
|
35
|
Herbert Sauro, Stanley Gu, Mats T Karlsson |
hsauro@u.washington.edu |
Advanced SubCellular Simulation Capabilities with the Systems Biology Workbench |
|
36
|
Howard Salis |
salis@psu.edu |
Biophysical Models of Translation, Translational Coupling, and Small RNA Regulation to Predict and Control Protein Expression |
|
37
|
Edward Sander, Victor Barocas |
edward-sander@uiowa.edu |
Multiscale Computational Simulations of Cell Compaction in Collagen Gels |
|
38
|
Abbas Shirinifard, Maciej Swat, James Glazier |
ashirini@indiana.edu |
A Predictive, Mechanism Based, Multicell Model of Pathological Vascularization in the Retinas |
|
39
|
Jim Sluka, Alin Cosmanescu, Maciek Swat, James Glazier |
jsluka@indiana.edu |
From Macro to Micro Dosimetry, Pharmacology and Toxicity: A multiscale modeling framework of Xenobiotics using open source tools.Poster available at: https://comptox.indiana.edu/tox/Welcome?action=AttachFile&do=view&target=J_Sluka__IMAG-MSM_Oct_2012.pptx |
|
40
|
Dalin Tang |
dtang@WPI.EDU |
An Interdisciplinary Multiscale Modeling Approach to Develop Right Ventricle Pulmonary Valve Replacement Surgical Procedures with a Contracting Band to
Improve Ventricle Ejection Fraction
|
|
41
|
Ines Thiele, Ronan Fleming |
ines.thiele@gmail.com |
Multiscale Molecular Systems Biology: Reconstruction and Model
Optimization
|
|
42
|
Maurizio Tomaiuolo |
mauriziotml@gmail.com |
Modeling thrombus formation in vivo. |
|
43
|
H.S.Udaykumar, J. S. Marshall, S. Vigmostad and K. B. Chandran |
hs-kumar@uiowa.edu |
Multi-scale modeling of blood flow in cardiovascular prosthetic devices |
|
44
|
Jacob Barhak |
jacob.barhak@gmail.com |
The Reference Model for Chronic Disease Progression - Poster |
|
45
|
Kevin Shelburne |
kevin.shelburne@comcast.net |
Single-Framework Models for Muscle-Driven Simulation Using Finite Element Modeling |
|
46
|
Xiaobo Zhou, Jing Su, Dan Wu, Jianguo Wen, Le Zhang, Jeff Chang, Youli Zu |
XZhou@tmhs.org |
Multiscale Modeling of Cancer Stem Cell Niche in Myeloma Development |
|
47
|
George Moody |
george@MIT.EDU |
Sharing Data and Software on PhysioNet |
|
*
|
Don Bolser, Teresa Pitts |
|
Paroxysmal coughing: in vivo investigations and model simulations |
|
*
|
JoAnne Flynn, Jennifer Linderman, Denise Kirschner |
|
Predicting immune responses that are protective against tuberculosis |
|
*
|
Lederer, Jafri, Winslow |
|
Calcium Entrained Arrhythmias |
|
*
|
Andrew McCulloch |
|
Multi-Scale Systems Models of Murine Heart Failure |
|
*
|
Raimond Winslow |
|
Redox Modification of the Arrhythmic Substrate in Heart Failure |
|
*
|
Scott Diamond |
|
Chemical, Pressure, and Shear Rate Gradients in Multiscale Blood Systems Biology |
|
*
|
Shu Chien |
|
Systems Biology Analyses for Hemodynamic Regulation of Vascular Homeostasis |
|
*
|
Sriram Neelamegham |
|
Glycosyltransferases regulating leukocyte-endothelial cell adhesion |
