This page allows users to run curated models from the Biomodels Database under JSim. To run these models online, you must have a Java plugin installed in your WWW browser. To run them in JSim on your own computer, download the model code and the JSim application. Either way, see Running JSim for instructions on how to use JSim. Since these models do not specify simulation time length or delta, these must be set by the user before running the model.

Notes:

• Models on this page require JSim version 2.03 or higher.
• JSim does not yet support SBML events. Those models containing SBML events will show warnings in the translated MML source code.
• Updated curated EMBL-EBI Biomodels on 24, April 2019.

Return to complete JSim model archives.

Currently available curated models

Terms of use

• Number of models in this archive: 710
• Number of models currently runnable under JSim: 643
• Number of runnable models containing unsupported events: 130