JSim Biomodels Page
This page allows users to run curated models from the Biomodels Database under JSim. To run these models online, you must have a Java plugin installed in your WWW browser. To run them in JSim on your own computer, download the model code and the JSim application. Either way, see Running JSim for instructions on how to use JSim. Since these models do not specify simulation time length or delta, these must be set by the user before running the model.
Notes:
- Models on this page require JSim version 2.03 or higher.
- JSim does not yet support SBML events. Those models containing SBML events will show warnings in the translated MML source code.
- Updated curated EMBL-EBI Biomodels on 24, April 2019.
Return to complete JSim model archives.
Currently available curated models
- Number of models in this archive: 710
- Number of models currently runnable under JSim: 643
- Number of runnable models containing unsupported events: 130
Displaying 261 - 280 of 710
BIO0261 : Tiago2010 FeMetabolism FeLoaded
BIO0262 : Fujita2010 Akt Signalling EGF
BIO0263 : Fujita2010 Akt Signalling NGF
BIO0264 : Fujita2010 Akt Signalling EGFRinhib
BIO0265 : Conradie2010 RPControl CellCycle
BIO0266 : Voit2003 Trehalose Cycle
BIO0267 : Lebeda2008 - BoNT paralysis (3 step model)
BIO0268 : Reed2008 Glutathione Metabolism
BIO0269 : Liu2010 Hormonal Crosstalk Arabidopsis
BIO0270 : Schilling2009 - ERK distributive
BIO0271 : Becker2010 EpoR CoreModel
BIO0272 : Becker2010 EpoR AuxiliaryModel
BIO0273 : Pokhilko2010 CircClock
BIO0274 : Rattanakul2003 BoneFormationModel
BIO0275 : Goldbeter2007 Somitogenesis Switch
BIO0276 : Shrestha2010 HypoCalcemia PTHresponse
BIO0277 : Shrestha2010 HyperCalcemia PTHresponse
BIO0278 : Lemaire2004 - Role of RANK/RANKL/OPG pathway in bone remodelling process
BIO0279 : Komarova2005 PTHaction OsteoclastOsteoblastCoupling
BIO0280 : Morris1981 MuscleFibre Voltage reduced