JSim CellML Models Page
This page allows users to run models from the CellML model archive under JSim. To run these models online, you must have Java installed on your computer. To run them in JSim on your own computer, download the model code and the JSim application. Either way, see Running JSim for instructions on how to use JSim. Since CellML models do not specify simulation time length or delta, these must be set by the user before running the model.
Users are strongly advised to read Running CellML Models under JSim before running CellML models under JSim.
Currently available models
- Number of CellML v1.0 models in the archive: 910
- Number of those models runnable under JSim: 840
- Number of those models passing unit balance: 698
- Models not passing unit balance are indicated by
Displaying 401 - 420 of 486
CML0407 : A Mathematical Model of Cardiocyte Ca2+ Dynamics with a Novel Representation of Sarcoplasmic Reticular Ca2+ Control
- snyder_palmer_moore_2000:
- snyder_palmer_moore_2000: [View MML]
CML0408 : Termination of Cardiac Ca2+ Sparks: An Investigative Mathematical Model of Calcium-Induced Calcium Release
- sobie_dilly_dossantoscruz_lederer_jafri_2002:
- sobie_dilly_dossantoscruz_lederer_jafri_2002: [View MML]File: sobie_dilly_dossantoscruz_lederer_jafri_2002.mod does Not exist!
CML0409 : Mathematical modelling of prolactin-receptor interaction and the corollary for prolactin receptor gene expression in skin
- soboleva_vetharaniam_nixon_montenegro_pearson_sneyd_2005:
- soboleva_vetharaniam_nixon_montenegro_pearson_sneyd_2005_a: [View MML]
- soboleva_vetharaniam_nixon_montenegro_pearson_sneyd_2005_b: [View MML]
CML0410 : A model of excitation and adaptation in bacterial chemotaxis
- spiro_parkinson_othmer_1997:
- spiro_parkinson_othmer_1997: [View MML]
CML0411 : A minimal mathematical model combining several regulatory cycles from the budding yeast cell cycle
- sriram_bernot_kepes_2007:
- sriram_bernot_kepes_2007: [View MML]
CML0412 : Epidermal Growth Factor Binding and Trafficking Dynamics in Fibroblasts: Relationship to Cell Proliferation
- starbuck_wiley_lauffenburger_1990:
- starbuck_wiley_lauffenburger_1990: [View MML]
CML0413 : Local Control Models of Cardiac Excitation-Contraction Coupling A Possible Role for Allosteric Interactions between Ryanodine Receptors
- stern_song_sham_yang_boheler_rios_1999:
- stern_song_sham_yang_boheler_rios_1999: [View MML]
CML0414 : Mathematical models of the electrical action potential of Purkinje fibre cells
- stewart_aslanidi_noble_noble_boyett_zhang_2009:
- stewart_aslanidi_noble_noble_boyett_zhang_2009: [View MML]
CML0415 : A physiologically based mathematical model of melatonin including ocular light suppression and interactions with the circadian pacemaker
- sthilaire_gronfier_zeitzer_klerman_2007:
- sthilaire_gronfier_zeitzer_klerman_2007: [View MML]
CML0416 : Analysis of a Model for the Pathogenesis of AIDS
- stilianakis_dietz_schenzle_1997:
- stilianakis_dietz_schenzle_1997: [View MML]
CML0417 : Recovery of Cable Properties Through Active and Passive Modeling of Subthreshold Membrane Responses From Laterodorsal Tegmental Neurons
- surkis_peskin_tranchina_leonard_1998:
- surkis_peskin_tranchina_leonard_1998: [View MML]File: surkis_peskin_tranchina_leonard_1998.mod does Not exist!
CML0418 : Modeling the fission yeast cell cycle: quantized cycle times in wee1- cdc25Delta mutant cells.
- sveiczer_csikasznagy_gyorffy_tyson_novak_2000:
- sveiczer_csikasznagy_gyorffy_tyson_novak_2000: [View MML]
CML0419 : A Quantitative Model for the Dynamics of Serum Prostate-Specific Antigen as a Marker for Cancerous Growth
- swanson_true_lin_buhler_vessella_murray_2001:
- swanson_true_lin_buhler_vessella_murray_2001: [View MML]
CML0420 :
- swat_kel_herzel_2004:
- swat_2004: [View MML]
CML0421 : Mechanism for the Universal Pattern of Activity in Developing Neuronal Networks
- tabak_mascagni_bertram_2010:
- tabak_mascagni_bertram_2010: [View MML]
CML0422 : Low dose of dopamine may stimulate prolactin secretion by increasing fast potassium currents
- tabak_toporikova_freeman_bertram_2007:
- tabak_toporikova_freeman_bertram_2007_a: [View MML]
- tabak_toporikova_freeman_bertram_2007_b: [View MML]
CML0423 : A model for human ventricular tissue
- tentusscher_noble_noble_panfilov_2004:
- tentusscher_noble_noble_panfilov_2004_a: [View MML]
- tentusscher_noble_noble_panfilov_2004_b: [View MML]
- tentusscher_noble_noble_panfilov_2004_c: [View MML]
CML0424 :
- tentusscher_noble_noble_panfilov_2006:
- tentusscher_noble_noble_panfilov_2006_c: [View MML]
CML0425 : Alternans and spiral breakup in a human ventricular tissue model.
- tentusscher_panfilov_2006:
- ten_tusscher_model_2006_IK1Ko_endo_units: [View MML]
- ten_tusscher_model_2006_IK1Ko_epi_units: [View MML]
- ten_tusscher_model_2006_IK1Ko_M_units: [View MML]
CML0426 :
- terkildsen_niederer_crampin_hunter_smith_2008:
- Hinch_et_al_2004: [View MML]
- Niederer_et_al_2006: [View MML]
- Pandit_et_al_2001_endo: [View MML]
- Pandit_Hinch_Niederer: [View MML]
- terkildsen_niederer_crampin_hunter_smith_2008: [View MML]