JSim CellML Models Page
This page allows users to run models from the CellML model archive under JSim. To run these models online, you must have Java installed on your computer. To run them in JSim on your own computer, download the model code and the JSim application. Either way, see Running JSim for instructions on how to use JSim. Since CellML models do not specify simulation time length or delta, these must be set by the user before running the model.
Users are strongly advised to read Running CellML Models under JSim before running CellML models under JSim.
Currently available models
- Number of CellML v1.0 models in the archive: 910
- Number of those models runnable under JSim: 840
- Number of those models passing unit balance: 698
- Models not passing unit balance are indicated by
Displaying 21 - 40 of 486
CML0021 : Simplified models for gas exchange in the human lungs
- bental_2006:
- bental_2006: View MML
CML0022 : A computationally efficient electrophysiological model of human ventricular cells
- bernus_wilders_zemlin_verschelde_panfilov_2002:
- bernus_wilders_zemlin_verschelde_panfilov_2002: View MMLFile: bernus_wilders_zemlin_verschelde_panfilov_2002.mod does Not exist!
CML0023 : Role for G protein G-beta-gamma isoform specificity in synaptic signal processing: a computational study
CML0024 : The Phantom Burster Model for Pancreatic Beta Cells
CML0025 : A phantom bursting mechanism for episodic bursting
CML0026 : Intra- and inter-islet synchronization of metabolically driven insulin secretion
- bertram_satin_pedersen_luciani_sherman_2007:
- bertram_satin_pedersen_luciani_sherman_2007: View MML
CML0027 : Calcium and Glycolysis Mediate Multiple Bursting Modes in Pancreatic Islets
CML0028 : A Calcium-based Phantom Bursting Model for Pancreatic Islets
- bertram_sherman_2004:
- bertram_sherman_2004: View MML
CML0029 : A role for calcium release-activated current (CRAC) in cholinergic modulation of electrical activity in pancreatic beta-cells
- bertram_smolen_sherman_mears_atwater_martin_soria_1995:
- bertram_smolen_sherman_mears_atwater_martin_soria_1995: View MML
CML0030 : Emergent Properties of Networks of Biological Signaling Pathways
- bhalla_iyengar_1999:
- bhalla_iyengar_1999_a: View MML
- bhalla_iyengar_1999_b: View MML
- bhalla_iyengar_1999_c: View MML
- bhalla_iyengar_1999_d: View MML
- bhalla_iyengar_1999_e: View MML
- bhalla_iyengar_1999_f: View MML
- bhalla_iyengar_1999_g: View MML
- bhalla_iyengar_1999_h: View MML
- bhalla_iyengar_1999_i: View MML
- bhalla_iyengar_1999_j: View MMLFile: bhalla_iyengar_1999_j.mod does Not exist!
CML0031 : A Bifurcation Analysis of Two Coupled Calcium Oscillators
- bindschadler_sneyd_2001:
- bindschadler_sneyd_2001: View MML
CML0032 : A mathematical model of the regulation system of the secretion of glucocorticoids
- bingzheng_zhenye_liansong_1990:
- bingzheng_zhenye_liansong_1990: View MML
CML0033 : Computer model of action potential of mouse ventricular myocytes
CML0034 : Risks and benefits of structured antiretroviral drug therapy interruptions in HIV-1 infection
CML0035 : Complex intracellular calcium oscillations. A theoretical exploration of possible mechanisms
CML0036 : Computational modeling reveals how interplay between components of a GTPase-cycle module regulates signal transduction
- bornheimer_maurya_farquhar_subramaniam_2004:
- bornheimer_2004: View MML
CML0037 : Control of the pacemaker activity of the sinoatrial node by intracellular Ca2+. Experiments and modelling
- boyett_zhang_garny_holden_2001:
- boyett_zhang_garny_holden_2001: View MML
CML0038 : Differential feedback regulation of the MAPK cascade underlies the quantitative differences in EGF and NGF signalling in PC12 cells.
- brightman_fell_2000:
- brightman_fell_2000: View MML
CML0039 : A mathematical model of diurnal variations in human plasma melatonin levels
- brown_choe_shanahan_czeisler_1997:
- brown_choe_shanahan_czeisler_1997: View MML
CML0040 : Mathematical modeling and spectral simulation of genetic diseases in the human heart
- bueno_2007:
- bueno_2007: View MML